Dr. Daria Berdnikova

2023

1.       D. V. Berdnikova*, S. Steup, M. Bolte, M. Suta, Chem. Eur. J. 2023, 29, e202300356.

Design of aurone-based dual-state emissive (DSE) fluorophores

2.       D. V. Berdnikova*, E. Y. Chernikova, ChemPhotoChem 2023, e202300140 [Review].

Fluorescence and phosphorescence energy transfer in cucurbituril-based supramolecular systems

3.       J. Schlosser, J. F. M. Hebborn, D. V. Berdnikova, H. Ihmels, Chemistry 2023, 5, 1220–1232.

Selective fluorimetric detection of pyrimidine nucleotides in neutral aqueous solution with a styrylpyridine-based cyclophane

2022

4.       D. V. Berdnikova*, B. M. Kriesche, T. Paululat, T. S. Hofer, Chem. Eur. J. 2022, 28, e202202752.

Fused bis(hemi-indigo): broad-range wavelength-independent photoswitches

2021

5.      D. V. Berdnikova*, Chem. Commun. 2021, 57, 10819–10826 [Highlight article].

Photoswitches for controllable RNA binding: a future approach in the RNA-targeting therapy

6.      T. Paululat, M. Rabe, D. V. Berdnikova, J. Magn. Reson. 2021, 327, 106990.

Modification of an NMR probe for monitoring of photoreactions

Front Cover

7.      D. V. Berdnikova, P. Carloni, S. Krauß, G. Rossetti, Molecules 2021, 26, 3384 [Review, a part of the special issue “RNA: still an under-exploited drug target”].

Role and perspective of molecular simulation-based investigation of RNA–ligand interaction: from small molecules and peptides to photoswitchable RNA binding

2020

8.      E. Y. Chernikova*, D. V. Berdnikova*, Chem. Commun. 2020, 56, 15360–15376 [Highlight article, a part of the themed collection “Chemical Communications HOT Articles”].

Cucurbiturils in nucleic acids research

9.      E. Y. Chernikova, D. V. Berdnikova, A. S. Peregudov, O. A. Fedorova, Y. V. Fedorov, ChemPhysChem 2020, 21, 442–449.

Encapsulation‐controlled photoisomerization of a styryl derivative: stereoselective formation of the anti Z‐isomer in the cucurbit[7]uril cavity

10.      D. V. Berdnikova, J. Heider, H. Ihmels, N. Sewald, P. M. Pithan, ChemPhotoChem 2020, 4, 520–525.

Photoinduced release of DNA‐binding ligands from the [4+4] dimers of benzo[b]quinolizinium and anthracene derivatives

11.      J. Becher, D. V. Berdnikova, H. Ihmels, C. Stremmel, Beilstein J. Org. Chem. 2020, 16, 2795–2806 [a part of the thematic issue “Molecular recognition”].

Synthesis and investigation of quadruplex-DNA-binding, 9-O-substituted berberine derivatives

2019

12.      D. V. Berdnikova*, Chem. Commun. 2019, 55, 8402–8405.

Visible-range hemi-indigo photoswitch: ON–OFF fluorescent binder for HIV‑1 RNA

13.      D. V. Berdnikova*, Beilstein J. Org. Chem. 2019, 15, 2822–2829 [a part of the special issue “Molecular switches”].

Design, synthesis and investigation of water-soluble hemi‑indigo photoswitches for bioapplications

2018

14.   D. V. Berdnikova*, N. I. Sosnin, O. A. Fedorova, H. Ihmels, Org. Biomol. Chem. 2018, 16, 545–554.

Governing the DNA-binding mode of styryl dyes by the length of their alkyl substituents – from intercalation to major groove binding

15.   D. V. Berdnikova*, Y. V. Fedorov, O. A. Fedorova, G. Jonusauskas, Dyes Pigm. 2018, 151, 227–232.

Supramolecular tuning of energy transfer efficiency and direction in a bis(styryl) dye–crown ether conjugate

16.   M. A. Ustimova, A. Y. Lebedeva, Y. V. Fedorov, D. V. Berdnikova, O. A. Fedorova, New J. Chem. 2018, 42, 7908–7913.

FRET‑based metal ion sensing by a crown-containing bisstyryl dye

2017

17.   D. V. Berdnikova*, T. Paululat, G. Jonusauskas, S. M. Peregudova, O. A. Fedorova, Org. Lett. 2017, 19, 5633–5636.

Protonation-gated dual photochromism of a chromene–styryl dye hybrid

18.   D. V. Berdnikova*, T. M. Aliyeu, S. Delbaere, Y. V. Fedorov, G. Jonusauskas, V. V. Novikov, A. A. Pavlov, A. S. Peregudov, N. E. Shepel', F. I. Zubkov, О. A. Fedorova, Dyes Pigm. 2017, 139, 397–402.

Regio- and stereoselective [2+2] photocycloaddition in Ba²⁺ templated supramolecular dimers of styryl-derivatized aza-heterocycles

19.   E. Y. Chernikova, D. V. Berdnikova, Y. V. Fedorov, O. A. Fedorova, F. Maurel, G. Jonusauskas, Phys. Chem. Chem. Phys. 2017,19, 25834–25839 [a part of the themed collection “2017 PCCP HOT Articles”].

Light-induced piston nanoengines: ultrafast shuttling of a styryl dye inside cucurbit[7]uril

20.   J. Becher, D. V. Berdnikova, D. Dzubiel, H. Ihmels, P. M. Pithan, Beilstein J. Org. Chem. 2017, 13, 203–212.

Interactions between photoacidic 3‑hydroxynaphtho[1,2-b]quinolizinium and cucurbit[7]uril: Influence on acidity in the ground and excited state

2016

21.   T. M. Aliyeu, D. V. Berdnikova*, O. A. Fedorova, E. N. Gulakova, C. Stremmel, H. Ihmels, J. Org. Chem. 2016, 81, 9075–9085.

Regiospecific photocyclization of mono- and bis-styryl-substituted N-heterocycles: a synthesis of DNA-binding benzo[c]quinolizinium derivatives

2015

22.   D. V. Berdnikova*, T. M. Aliyeu, T. Paululat, Y. V. Fedorov, O. A. Fedorova, H. Ihmels, Chem. Commun. 2015, 51, 4906–4909.

DNA–ligand interactions gained and lost: light-induced ligand redistribution in a supramolecular cascade

23.   D. V. Berdnikova, H. Ihmels, H. Schönherr, M. Steuber, D. Wesner, Org. Biomol. Chem. 2015, 13, 3766–3770.

Photoinduced formation of stable Ag-nanoparticles from a ternary ligand-DNA-Ag⁺ complex

24.   D. V. Berdnikova, O. A. Fedorova, E. V. Tulyakova, H. Li, S. Kölsch, H. Ihmels, Photochem. Photobiol. 2015, 91, 723–731 [a part of the special issue dedicated to the memory of Michael Kasha].

Interaction of crown ether-annelated styryl dyes with double-stranded DNA

2014

25.   E. N. Gulakova, D. V. Berdnikova*, T. M. Aliyeu, Y. V. Fedorov, I. A. Godovikov, O. A. Fedorova, J. Org. Chem. 2014, 79, 5533–5537.

Regiospecific C–N photocyclization of 2-styrylquinolines

2013

26.   D. V. Berdnikova*, Y. V. Fedorov, O. A. Fedorova, Dyes Pigm. 2013, 96, 287–295.

Azadithiacrown ether based ditopic receptors capable of simultaneous multi-ionic recognition of Ag⁺ and Hg²⁺

27.   E. Y. Chernikova, D. V. Berdnikova, Y. V. Fedorov, O. A. Fedorova, Macroheterocycles 2013, 6, 234–239.

Effective stabilization of cis-isomer of styryl dye inside the cucurbit[7]uril cavity

2012

28.   D. Berdnikova, O. Fedorova, E. Gulakova, H. Ihmels, Chem. Commun. 2012, 48, 4603–4605.

Photoinduced in situ generation of a DNA‑binding benzothiazoloquinolinium derivative

29.   E. Chernikova, D. Berdnikova, Y. Fedorov, O. Fedorova, A. Peregudov, L. Isaacs, Chem. Commun. 2012, 48, 7256–7258.

Self‑assembly of a ternary architecture driven by cooperative Hg²⁺ ion binding between cucurbut[7]uril and crown ether macrocyclic hosts

2009

30.   M. Y. Koroleva, D. V. Berdnikova, B. V. Spitsyn, E. V. Yurtov, Theor. Found. Chem. Eng. 2009, 43, 478–481.

Sedimentation stability of aqueous dispersions of nanodiamond agglomerates